Inconsistent theories are theories which cannot both be true. The standard model and general relativity are not inconsistent in the sense that they are contradictory. Neither theory has anything to say about what the other describes.
If you try to apply the standard model to a situation in which your interactions are occurring in a very large gravitational potential, you will not know what to do with you information about the potential because the standard model Lagrangian has no place for gravitational potentials.
If you try to use general relativity to describe atomic phenomena, you will have no mathematical machinery at hand to make any calculations about atomic phenomena, because it is not a theory of atomic physics.
A mathematical proof of inconsistency is a tall order. It would kill one of the theories, assuming the remaining theory is true, and would kill all theories that attempt to unify both theories.