I'll divide this answer into two parts. In the first, I wish to dispel/prevent any possible category errors here.
Ground rules from the philosophy of science
There are claims that the standard model is a theory which explains almost all phenomenon that we see in the world. I am wondering what scientific evidence backs this claim?
To say a theory explains observed phenomena is to say those phenomena are among its predictions. The evidence for this claim is, of course, the phenomena themselves.
To what degree is this claim scientific?
By "scientific", you might mean "amenable to scientific analysis" or "well attested in the light of such analysis". These respectively apply to falsifiable claims and claims whose predictions concord with observation. So, as aforesaid, the SM is scientific on both counts.
It seems that there are a few parts to this claim
"This claim" meaning what the SM claims, rather than the previously discussed claim that the SM explains observed phenomena. The parts you identify in dissecting the SM are how we make the aforementioned predictions. To take a much simpler example, the claim that people have minds with certain internal states, responsive to and influencing their bodies in certain ways, explains people's observed behaviour. You can't see minds or quantum fields directly, just their observable effects.
SM-related phenomena specifically
Warning: I'll mention some lines of evidence, but each is mentioned only very briefly.
There are no fundamental bulk effects, i.e. there are no fundamental interactions between groups of particles. Any macro-scale properties are emergent properties coming from interactions at a smaller scale.
That seems a fair summary of what's claimed. In other words, (i) interactions between composite particles are an emergent consequence of those between fundamental ones, and (ii) we respectively call these interactions emergent and fundamental. While (ii) is a definition, (i) is a claim about Nature.
What physical evidence is there for these beliefs? Just because we find laws governing the relationships between particles, and find them to be constituents of matter at larger scales, what evidence do we have for this claim of total reductionism? What evidence do we have that there exist “building blocks” of matter, and that all matter is entirely determined by those building blocks?
This splits into two issues we should address in the reverse of the order you raised them: how do we know (in the evidence-fits-predictions sense of know) there are such building blocks, and how do we know fundamental interactions are sufficient to explain interactions between composite structures?
For the first question, we gradually work down to smaller components (e.g. Brownian motion attests to the existence of atoms, chemistry attests to the electronic configurations and NMR spectroscopy to their nuclear structures, observation of beta decay shows neutrinos exist, and the classification of hadrons supports their quark-gluon structure). While one can never prove a particle doesn't have a substructure, the claim that it doesn't predicts it has no discernible size, and that's true so far of electrons and quarks, down to length scales of $10^{-18}$ m. Any substructure they may have hasn't been shown to have better predictions of observation.
For the second question, it takes detailed calculations to show fundamental interactions predict atoms' ionization energies and electronegativities, and van der Waal forces. From these follow predictions in chemistry and bulk predictions, such as materials' viscosity, boiling point etc. So far, while many predictions of "bulk forces are emergent" have been successful, none have proven unworkable. We will acknowledge non-reductionist interactions when we find them. (They will only be "not reductionist yet", just in case reduction is eventually possible; for example, this is what happened with friction, elastic forces, vibrations etc.)