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The mass of proton is 1.672 × 10−27 kg while it is 1.675 × 10−27 kg. Both are made up of 3 quarks each. Then what makes proton lighter than a neutron?

Nick T
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Note that the combined rest masses of the quarks (~10 MeV/$c^2$) account for about 1% of the proton and neutron mass (~938 MeV/$c^2$), the main contribution to the mass are the gluons from the Strong Force. Since the composition of the proton and neutron are different, so is the force that binds them.

Paul
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