I do not mean I want to make install the tar.bz program, I already downloaded a executable binary program - thunderbird-31.4.0.tar.bz2, if you ask, and I can click it and run. But the thing is how can I install it to the sys menu, or GNOME Shell I don't what it called, just like the system default program and the program installed through Ubuntu Software Centre.
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Once the application is opened, it'll show up in the dash (the bar to the right of your screen). Right-click the icon and click "Lock to Launcher")
Have a look at How to Install Software on Ubuntu for a Windows User as well as this might help you too!