Why doesn't: sudo update-alternatives --config x-terminal-emulator
Work to change the default terminal in 12.10 ubuntu-one nautilus? I find it
confusing.
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Since Ubuntu 12.04 there is a new tool to change default applications. According to this answer, we need to use gsettings now. I can confirm that it works on Ubuntu 13.10.
For example, if you want to use Sakura as default terminal:
gsettings set org.gnome.desktop.default-applications.terminal exec 'sakura'